ferrix: I appreciate your reply. The folder nodes DO exist on the S3 side. Just not on the local side. I want to duplicate the layout I have on S3 locally.
If you didn't use s3sync to store it (which we already know you didn't) then no there aren't any *s3sync* folder nodes. In S3 there's no actual concept of folders, just nodes. So, every tool uses its own proprietary way of storing this info (my scheme being the best naturally) and in general the methods are not compatible.
Don't worry though because by popular demand I am adding --make-dirs to the next version.